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遺伝子領域一覧
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Gene Region
Nuclear Chloroplast Mitochondria
生薬名 基原 5Ss 18S ITS1 5.8S ITS2 26S others trnH-psbA matK trnK trnK-rps16 trnT-L trnL trnL-F rbcL rpoC1 ndhF others
茵陳蒿 Artemisia capillaris Thunberg (IPNI:179314-1)
鬱金 Curcuma longa Linné (IPNI:796451-1)
trnS-trnfM
 AB370931
 AB370934
 AB370929
 AB370932
 AB370927
 AB370930
 AB370933
 AB370928
rpoB2
  EU492377
rpoB-like
  EU492378
 EU492371
accD
  EU492372
 EU492380
 EU492381
cox1
 EU069563
延胡索 Corydalis turtschaninovii forma yanhusuo Y.H.Chou et C.C.Hsu (IPNI:888049-1)
黄耆 Astragalus mongholicus Bunge (IPNI:478720-1)
nad1
 EF685972
cox1
  EF685986
Astragalus membranaceus Bunge (IPNI:478611-1)
黄芩 Scutellaria baicalensis Georgi (IPNI:458155-1)
rpoB
 EU590871
accD
  EU590902
rpl16
  AB112068
 GQ374124 
黄柏 Phellodendron amurense Ruprecht (IPNI:774774-1)
atpB
 AF066833
Phellodendron chinense C.K.Schneider (IPNI:774776-1)
黄連 Coptis japonica Makino (IPNI:710316-1)
Coptis chinensis Franchet (IPNI:710313-1)
trnD-trnY-trnE-trnT
 AB159549
Coptis deltoidea C.Y.Cheng et Hsiao (NCBI:txid261449)
trnY-trnE
 AB159548
ycf5
 GQ435670
 GQ435671
Coptis teeta Wallich (IPNI:710326-1)
trnY-trnE
 AB159547
遠志 Polygala tenuifolia Willdenow (IPNI:692440-1)
葛根 Pueraria lobata Ohwi (IPNI:214449-2)
rpoB-trnC
 EF549835
 trnS-trnG
  EF549930
clpP
  EU717225
rpl2
  EU717366
atpB
  EU717435
rps16
  EU717501
ycf4
  AF311835
Pueraria montana var. thomsonii M.R.Almeida (IPNI:20008484-1)
栝楼根 Trichosanthes kirilowii var. japonica Kitamura (NCBI:txid61011)
karasurin precursor gene
 AB000666
Trichosanthes bracteata Voigt (IPNI:294157-1)
Trichosanthes kirilowii Maximowicz (IPNI:294222-1)
TCS
 AY082348
 AF367252
 AY669811
 AY082349
 S70176
 TKU25675
gas1
  AY379779
TCM
  AY584242
rpl20-rps12
  DQ536603
乾姜 Zingiber officinale Roscoe (IPNI:798372-1)
CHS1
 DQ089697
CHS2
  DQ851164
CHS3
  DQ851165
CHS4
  DQ851166
rps16
 AF141095
甘草 Glycyrrhiza glabra Linné (IPNI:496941-1)
lectin
 HQ337023
RAPD marker
  HQ883981
lectin1
  AJ234388
lectin2
  AJ234389
Glycyrrhiza uralensis Fischer ex De Candolle (IPNI:496974-1)
P450
 AY870908
 AY870909
PIP1
  EU262597
SQS1
  EU851906
 EU851907
 EU851908
 EU851909
莪朮 Curcuma phaeocaulis Valeton (IPNI:872383-1)
Curcuma zedoaria Roscoe (IPNI:872393-1)
trnS-trnfM
 AB370939
 AB370942
 AB370940
 AB370943
 AB370941
rpoB2
  EU492366
accD
  EU492369
rpoC-like
  EU492375
Curcuma kwangsiensis S.G.Lee et C.F.Liang (IPNI:872373-1)
petA-psbJ
 JF730287
psbK-psbI
 GU180471
 GU180468
 GU180469
 GU180470
rpoB
 GU180561
 GU180562
 GU180563
 GU180564
桔梗 Platycodon grandiflorus A.De Candolle (IPNI:144523-1)
atpB
 EU437586
trnS-trnC
  AY865175
菊花 Chrysanthemum morifolium Ramatuelle (IPNI:193606-1)
trnS-trnC
 AY865210
trnG-trnT
  AY865254
trnE-trnY-rpoB
  AY865304
16S-trnI-trnA
  EF010922
 EF010923
rpl16
  EF091653
 EF091654
 EF091656
 EF091658
Chrysanthemum indicum Linné (IPNI:193510-1)
BADH
 EF683590
CHS24
 AF511461
CHS3
 AF511459
CHS39
 AF511462
CHS4
 AF511460
ETS
 AB359822
 AB359823
 AB359824
枳実 Citrus aurantium var. daidai Makino (NCBI:txid1925543)
Citrus natsudaidai Hayata (IPNI:771993-1)
CCoAMT
 AB035144
rpl16
 AB514121
Citrus × aurantium Linné (IPNI:59600-2)
rpoB
 GQ248746
 EF590435
atpF-atpH
  GQ247927
atpB
  EF118842
 EF118843
atpB-rbcL
  EF126512
 EF126513
rps16
  EF126580
 EF126581
rps4-trnT
  EF134644
 EF134645
psbM-trnD
  EF164824
 EF164825
trnS-trnG
  EF176508
 EF176509
ycf5
  EF590805
accD
  EF590861
ndhJ
  EF590930
羌活 Notopterygium forbesii H.Boissieu (IPNI:845196-1)
Notopterygium incisum K.C.Ting ex H.T.Chang (IPNI:845199-1)
杏仁 Prunus armeniaca var. ansu Maximowicz (NCBI:txid170481)
psbA
 AF410186
Prunus armeniaca Linné (IPNI:729463-1)
atpB-rbcL
 CAM282870
 AM282871
 EF513136
rpl16
 AB469163
 AY500663
trnS-trnG
  AY500725
Prunus sibirica Linné (IPNI:324747-2)
atpB-rbcL
 EF513138
ycf5
 GQ435714
rpl16
 AB469164
苦参 Sophora flavescens Aiton (IPNI:518831-1)
SFL
 EU652723
荊芥 Schizonepeta tenuifolia Briquet (IPNI:458037-1)
rpoB
 EU590867
accD
  EU590899
ycf5
  FJ513181
桂皮 Cinnamomum cassia Nees ex Blume (IPNI:463346-1)
紅参 Panax ginseng C.A.Meyer (IPNI:91472-1)
16S
 EF550997
香附子 Cyperus rotundus Linné (IPNI:305797-1)
厚朴 Magnolia officinalis Rehder et E.H.Wilson (IPNI:554787-1)
GAI1
 EU849784
 EU849788
Leafy
 EU849883
 EU849886
PHYA
 EU849984
 EU849987
ORF350
 AY008885
petB-petD
 AY590846
ycf5
 GQ435676
Magnolia officinalis var. biloba Rehder et E.H.Wilson (IPNI:50997083-1)
atpB-rbcL
 AB021060
rps16
 EU221526
Magnolia obovata Thunberg (IPNI:554784-1)
GAI1
 EU849763
Leafy
  EU849862
PHYA
  EU849963
atpB-rbcL
 AB021059
rps16
  AB237240
 AB237239
rpl16
  AB237244
牛膝 Achyranthes fauriei H.Léveillé et Vaniot (IPNI:58726-1)
Achyranthes bidentata Blume (IPNI:58678-1)
呉茱萸 Euodia bodinieri Dode (IPNI:772935-1)
牛蒡子 Arctium lappa Linné (IPNI:178385-1)
ETS
 AB254774
rps4-trnT-trnL
 EU661123
五味子 Schisandra chinensis Baillon (IPNI:60456331-2)
rpl16
 AM421608
 AY326480
psbB-psbT-psbN-psbH
  AY007470
psbE-psbF-psbL-psbJ
  AY007485
psbD-psbC
  AF239791
rpl2
  AY007498
petB-petD
  AY590866
trnK-psbA
  DQ185526
atpB
  AF093400
 AF239790
rps12-rps7-ndhB
  AF238075
柴胡 Bupleurum falcatum Linné (IPNI:839147-1)
rps16
 AF110566
Bupleurum chinense De Candolle (IPNI:839099-1)
細辛 Asiasarum sieboldii F.Maekawa (IPNI:93597-1)
rps16
 AB299903
 AB299921
 AB299922
psbC-trnS
  AB299957
 AB299958
 AB299959
Asiasarum heterotropoides var. mandshuricum F.Maekawa
rps16
 AB299902
psbC-trnS
  AB299939
Asiasarum heterotropoides var. seoulense F.Maekawa
サフラン Crocus sativus Linné (IPNI:436688-1)
psbA
 EU110147
rpL36-rpS8
  EU110729
atpF-atpH
  EU523362
accD
  EU110282
山梔子 Gardenia jasminoides J.Ellis (IPNI:751073-1)
atpB-rbcL
 FJ493372
山茱萸 Cornus officinalis Siebold et Zuccarini (IPNI:271629-1)
PI
 EU447705
 EU447706
atpB
 AJ236229
山椒 Zanthoxylum piperitum De Candolle (IPNI:775951-1)
酸棗仁 Ziziphus jujuba var. spinosa Hu ex H.F.Chou (NCBI:txid714518)
ycf5
 GQ435764
刺五加 Eleutherococcus senticosus Maximowicz (IPNI:90431-1)
芍薬 Paeonia lactiflora Pallas (IPNI:711802-1)
GPAT
 AY016249
Adh2
  DQ313772
 DQ313773
 AF009068
Adh1A
  AF009049
 AF009050
rps16-trnQ
 DQ313804
matR
 EU281114
車前子 Plantago asiatica Linné (IPNI:684897-1)
Plantago depressa Willdenow (IPNI:685094-1)
生姜 Zingiber officinale Roscoe (IPNI:798372-1)
CHS1
 DQ089697
CHS2
  DQ851164
CHS3
  DQ851165
CHS4
  DQ851166
rps16
 AF141095
升麻 Cimicifuga dahurica Huth (IPNI:709429-1)
Cimicifuga foetida Linné (IPNI:709433-1)
Cimicifuga heracleifolia Komarov (IPNI:709435-1)
atpB
 EU053878
Cimicifuga simplex Wormskjold ex De Candolle (IPNI:709448-1)
辛夷 Magnolia kobus De Candolle (IPNI:332100-2)
GAI1
 EU849764
Leafy
 EU849863
PHYA
 EU849964
5S rRNA
 X16976
atpB-rbcL
 AB021068
ORF350
 AY008862
Magnolia biondii Pampanini (IPNI:554647-1)
atpB-rbcL
 AY008956
Magnolia sprengeri Pampanini (IPNI:554854-1)
GAI1
 EU849725
 EU849779
Leafy
 EU849825
 EU849878
PHYA
 EU849925
 EU849979
rps16
 EU221530
Magnolia heptapeta Dandy (IPNI:554733-1)
Magnolia salicifolia Maximowicz (IPNI:554831-1)
GAI1
 EU849770
Leafy
  EU849869
PHYA
  EU849970
rps16
 AB237245
 AB237246
rpl16
  AB237249
trnG
  AB237250
 AB237251
atpB-rbcL
  AB237255
 AB237256
 AB021069
accD-psaI
  AB237257
trnS-trnG
  AB237258
trnW-trnP
  AB237252
petB
  AB237253
petD-rpoA
  AB237254
地黄 Rehmannia glutinosa var. purpurea Makino
Rehmannia glutinosa Steudel (IPNI:808644-1)
atpB-rbcL
 AY423106
rps2
  FJ172711
rps16
  FJ172697
 DQ856487
cox1
 AJ247589
地骨皮 Lycium chinense Miller (IPNI:816389-1)
atpB
 FJ914152
Lycium barbarum Linné (IPNI:816356-1)
atpB
 AM233336
熟地黄 Rehmannia glutinosa var. purpurea Makino
Rehmannia glutinosa Steudel (IPNI:808644-1)
atpB-rbcL
 AY423106
rps2
  FJ172711
rps16
  FJ172697
 DQ856487
cox1
 AJ247589
赤芍 Paeonia lactiflora Pallas (IPNI:711802-1)
GPAT
 AY016249
Adh2
  DQ313772
 DQ313773
 AF009068
Adh1A
  AF009049
 AF009050
rps16-trnQ
 DQ313804
matR
 EU281114
川芎 Cnidium officinale Makino (IPNI:840466-1)
Ligusticum chuanxiong hort. ex S.H.Qiu et al. (NCBI:txid2689076)
蒼朮 Atractylodes lancea De Candolle (IPNI:182976-1)
psbB-psbH
 EU931334
atpB-rbcL
  EU931326
Atractylodes chinensis Koidzumi (IPNI:182972-1)
psbB-psbH
 EU931335
atpB-rbcL
  EU931327
Atractylodes lancea × Atractylodes chinensis (NCBI:txid334519)
桑白皮 Morus alba Linné (IPNI:30051955-2)
rbcL-accD
 AB194397
rps16
  EF687667
 EF687668
 EF687670
 EF687671
 EF687679
 EF687682
Morus mongolica C.K.Schneider (IPNI:584372-1)
rps16
 EF687675
蘇葉 Perilla frutescens var. acuta Kudo (NCBI:txid279737)
Perilla frutescens var. crispa W.Deane (IPNI:190344-2)
大棗 Ziziphus jujuba var. inermis Rehder (NCBI:txid1451284)
沢瀉 Alisma orientale Juzepczuk (IPNI:58233-1)
大黄 Rheum coreanum Nakai (IPNI:696723-1)
Rheum officinale Baillon (IPNI:696768-1)
CHS
 HM217095
trnS-trnG
 AY920226
 AY920227
accD
  EU553977
 EU840436
ndhJ
  EU553995
poB2
  EU554024
psaA
  EU840352
ycf5
  FJ503045
 GQ435854
 GQ435855
Rheum palmatum Linné (IPNI:696772-1)
trnS-trnG
 AY920225
 AY920228
accD
  EU553978
ndhJ
  EU553996
poB2
  EU554025
ycf5
  FJ503037
Rheum tanguticum Maximowicz ex Balfour (IPNI:696803-1)
trnS-trnG
 AY920224
 AY920229
accD
  EU553979
ndhJ
  EU553997
poB2
  EU554026
ycf5
  FJ503038
竹節人参 Panax japonicus C.A.Meyer (IPNI:91487-1)
trnC-petN-psbM-trnD
 AY275927
 AY275928
nad1
 EU551721
知母 Anemarrhena asphodeloides Bunge (IPNI:530140-1)
atpB
 AJ417570
cob
 DQ859077
atpA
 AY299711
丁子 Syzygium aromaticum Merrill et L.M.Perry (IPNI:601421-1)
rpl16
 DQ088419
釣藤鈎 Uncaria sinensis Haviland (IPNI:768314-1)
Uncaria macrophylla Wallich (IPNI:768275-1)
Uncaria rhynchophylla Miquel (IPNI:768297-1)
ETS
 AJ812080
rps16
 AB178637
猪苓 Polyporus umbellatus Fries (GBIF:5246840)
28S
 AB368109
 AJ489167
 AJ489168
rpb2
  AB368166
btub1
  EU442269
 EU442271
 EU442274
small subunit ribosomal RNA
 AF358741
atp6
  AB368051
陳皮 Citrus unshiu Marcowicz (IPNI:772094-1)
Citrus reticulata Blanco (IPNI:772038-1)
rpoB
 GQ248747
rpoB2
  EF590436
psbK-psbI
  GQ248434
atpF-atpH
  GQ247928
psbA
  AY095445
trnA-trnI
  AY690321
16S-trnI-trnA-23S
  DQ001754
ycf5
  F590806
accD
  EF590862
ndhJ
  EF590931
atpB
  EF118864
 EF118865
atpB-rbcL
  EF126537
 EF126538
rps16
  EF126604
rps4-trnT
  EF134669
 EF134670
psbM-trnD
  EF164849
 EF164850
trnS-trnG
  EF176533
 EF176534
Citrus reticulata × Citrus unshiu (NCBI:txid558540)
天麻 Gastrodia elata Blume (IPNI:635522-1)
天門冬 Asparagus cochinchinensis Merrill (IPNI:531041-1)
petD-rpoA
 AB177735
petB
  AB177710
当帰 Angelica acutiloba var. sugiyamae Hikino (IPNI:60470529-2)
rpl16-rpl14
 AB199892
atpF-atpA
 AB200215
Angelica acutiloba Kitagawa (IPNI:837548-1)
rpl16-rpl14
 AB199891
atpF-atpA
  AB200214
桃仁 Prunus persica var. davidiana Maximowicz
Prunus persica Batsch (IPNI:1212858-2)
rpl16
 AB469167
 AY500671
trnS-trnG
  AY500733
rpl20-rps12
  AY968557
ndhF-like gene
  EU669129
atpB
  AF209660
psbA
  AF410189
 AF410190
nad1
 AY968485
人参 Panax ginseng C.A.Meyer (IPNI:91472-1)
16S
 EF550997
薄荷 Mentha arvensis var. piperascens Malinvaud [=Mentha canadensis (NCBI:txid294733)]
rpl16
 AY618532
半夏 Pinellia ternata Teore ex Breitenbach (IPNI:88088-1)
lectin gene
 AY725425
rpl20-rps12
 AY248931
atpB-rbcL
  FJ638617
rps16
  EU193501
cox1
 EF517178
 AY243112
貝母 Fritillaria verticillata var. thunbergii Baker
麦門冬 Ophiopogon japonicus Ker Gawler (IPNI:429781-1)
白芷 Angelica dahurica Bentham et Hooker filius ex Franchet et Savatier (IPNI:60451989-2)
rpoB
 GQ248725
rpoB2
  EF590424
accD
  EF590850
atpF-atpH
  GQ247906
白朮 Atractylodes japonica Koidzumi ex Kitamura (IPNI:182974-1)
trnS-trnC
 AY865189
trnE-trnY-rpoB
  AY865283
trnG-trnT
  AY865233
atpB-rbcL
  EU931329
psbB-psbH
  EU931337
Atractylodes macrocephala Koidzumi (IPNI:182978-1)
atpB-rbcL
 EU931325
psbB-psbF-psbN-psbH
  EU931333
檳榔子 Areca catechu Linné (IPNI:664107-1)
PRK gene
 AY348906
rpb2
 AY543109
 FJ200373
PRK gene
  AF453333
malate synthase gene
  AF455572
ycf5
 GQ435846
茯苓 Wolfiporia cocos Ryvarden et Gilbertson (GBIF:2549306)
28S
 EF397598
 EF397599
 EF397600
25S
  AF393081
附子 Aconitum carmichaelii Debeaux (IPNI:707241-1)
Aconitum japonicum Thunberg (IPNI:707472-1)
防已 Sinomenium acutum Rehder et E.H.Wilson (IPNI:581373-1)
atpB
 FJ026446
防風 Saposhnikovia divaricata Schischkin (IPNI:847902-1)
牡丹皮 Paeonia suffruticosa Andrews (IPNI:711877-1)
atpB
 AF093389
 AF209643
麻黄 Ephedra intermedia Schrenk et C.A.Meyer (IPNI:383409-1)
Ephedra equisetina Bunge (IPNI:928049-1)
Ephedra sinica Stapf (IPNI:383460-1)
psbB-psbT-psbN-psbH
 AY007462
psbE-psbF-psbL-psbJ
  AY007477
psbD-psbC
  AF239780
atpB
  AY056526
 AF239779
rps4-trnS
  AY591446
 AY591486
rps12-rps7
  AF238067
rps4
  AY755824
 AY755826
cox1
 DQ987887
麻子仁 Cannabis sativa Linné (IPNI:306087-2)
rps4
 EU002301
psbB-psbT-psbN-psbH
  EU002390
rpoC2
  EU002481
trnK-psbA
  DQ004501
 DQ004502
 DQ004503
 DQ004504
 DQ004505
薏苡仁 Coix lacryma-jobi var. ma-yuen Stapf (IPNI:60461956-2)
rpoC2
 AY174476
nad3-rps12
 AF239263
竜胆 Gentiana manshurica Kitagawa (IPNI:368483-1)
Gentiana triflora Pallas (IPNI:369055-1)
Gentiana scabra Bunge (IPNI:368876-1)
rpl16
 AB453143
 AB453145
Gentiana scabra × Gentiana triflora (NCBI:txid553040)
rpl16
 AB453147
 AB453148
 AB453146
Gentiana triflora var. japonica H.Hara (NCBI:txid412118)
連翹 Forsythia suspensa Vahl (IPNI:608900-1)
rps16
 AF225231
Forsythia viridissima Lindley (IPNI:608903-1)